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DOI: 10.7155/jgaa.00131
Efficient drawing of RNA secondary structure
Vol. 10, no. 2, pp. 329-351, 2006. Regular paper.
Abstract In this paper, we propose a new layout algorithm that draws the
secondary structure of a Ribonucleic Acid (RNA) automatically
according to some of the biologists' aesthetic criteria. Such
layout insures that two equivalent structures (or sub-structures)
are drawn in a same and planar way. In order to allow a visual
comparison of two RNAs, we use an heuristic that places the
biggest similar part of the two structures in the same position
and orientation.
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